Store healthcare data with client libraries

import (
	"context"
	"fmt"
	"io"
	"time"

	healthcare "google.golang.org/api/healthcare/v1"
)

// createDataset creates a dataset.
func createDataset(w io.Writer, projectID, location, datasetID string) error {
	// Set a deadline for the dataset to become initialized.
	ctx, cancel := context.WithTimeout(context.Background(), 2*time.Minute)
	defer cancel()

	healthcareService, err := healthcare.NewService(ctx)
	if err != nil {
		return fmt.Errorf("healthcare.NewService: %w", err)
	}

	datasetsService := healthcareService.Projects.Locations.Datasets

	parent := fmt.Sprintf("projects/%s/locations/%s", projectID, location)

	resp, err := datasetsService.Create(parent, &healthcare.Dataset{}).DatasetId(datasetID).Context(ctx).Do()
	if err != nil {
		return fmt.Errorf("Create: %w", err)
	}

	// The dataset is not always ready to use immediately, instead a long-running operation is returned.
	// This is how you might poll the operation to ensure the dataset is fully initialized before proceeding.
	// Initialization usually takes less than a minute.
	for !resp.Done {
		time.Sleep(15 * time.Second)
		resp, err = datasetsService.Operations.Get(resp.Name).Context(ctx).Do()
		if err != nil {
			return fmt.Errorf("Operations.Get(%s): %w", resp.Name, err)
		}
	}

	fmt.Fprintf(w, "Created dataset: %q\n", resp.Name)
	return nil
}

import com.google.api.client.http.HttpRequestInitializer;
import com.google.api.client.http.javanet.NetHttpTransport;
import com.google.api.client.json.JsonFactory;
import com.google.api.client.json.gson.GsonFactory;
import com.google.api.services.healthcare.v1.CloudHealthcare;
import com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets;
import com.google.api.services.healthcare.v1.CloudHealthcareScopes;
import com.google.api.services.healthcare.v1.model.Dataset;
import com.google.api.services.healthcare.v1.model.Operation;
import com.google.auth.http.HttpCredentialsAdapter;
import com.google.auth.oauth2.GoogleCredentials;
import java.io.IOException;
import java.util.Collections;

public class DatasetCreate {
  private static final String DATASET_NAME = "projects/%s/locations/%s/datasets/%s";
  private static final JsonFactory JSON_FACTORY = new GsonFactory();
  private static final NetHttpTransport HTTP_TRANSPORT = new NetHttpTransport();

  public static void datasetCreate(String projectId, String regionId, String datasetId)
      throws IOException {
    // String projectId = "your-project-id";
    // String regionId = "us-central1";
    // String datasetId = "your-dataset-id";

    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();

    // Configure the dataset to be created.
    Dataset dataset = new Dataset();
    dataset.setTimeZone("America/Chicago");

    // Create request and configure any parameters.
    String parentName = String.format("projects/%s/locations/%s", projectId, regionId);
    Datasets.Create request = client.projects().locations().datasets().create(parentName, dataset);
    request.setDatasetId(datasetId);

    // Execute the request, wait for the operation to complete, and process the results.
    try {
      Operation operation = request.execute();
      System.out.println(operation.toPrettyString());
      while (operation.getDone() == null || !operation.getDone()) {
        // Update the status of the operation with another request.
        Thread.sleep(500); // Pause for 500ms between requests.
        operation =
            client
                .projects()
                .locations()
                .datasets()
                .operations()
                .get(operation.getName())
                .execute();
      }
      System.out.println("Dataset created. Response content: " + operation.getResponse());
    } catch (Exception ex) {
      System.out.printf("Error during request execution: %s\n", ex.toString());
      ex.printStackTrace(System.out);
    }
  }

  private static CloudHealthcare createClient() throws IOException {
    // Use Application Default Credentials (ADC) to authenticate the requests
    // For more information see https://cloud.google.com/docs/authentication/production
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));

    // Create a HttpRequestInitializer, which will provide a baseline configuration to all requests.
    HttpRequestInitializer requestInitializer =
        request -> {
          new HttpCredentialsAdapter(credential).initialize(request);
          request.setConnectTimeout(60000); // 1 minute connect timeout
          request.setReadTimeout(60000); // 1 minute read timeout
        };

    // Build the client for interacting with the service.
    return new CloudHealthcare.Builder(HTTP_TRANSPORT, JSON_FACTORY, requestInitializer)
        .setApplicationName("your-application-name")
        .build();
  }
}

const google = require('@googleapis/healthcare');
const healthcare = google.healthcare({
  version: 'v1',
  auth: new google.auth.GoogleAuth({
    scopes: ['https://www.googleapis.com/auth/cloud-platform'],
  }),
});

const createDataset = async () => {
  // TODO(developer): uncomment these lines before running the sample
  // const cloudRegion = 'us-central1';
  // const projectId = 'adjective-noun-123';
  // const datasetId = 'my-dataset';
  const parent = `projects/${projectId}/locations/${cloudRegion}`;
  const request = {parent, datasetId};

  await healthcare.projects.locations.datasets.create(request);
  console.log(`Created dataset: ${datasetId}`);
};

createDataset();

# Imports the Dict type for runtime type hints.
from typing import Dict


def create_dataset(project_id: str, location: str, dataset_id: str) -> Dict[str, str]:
    """Creates a Cloud Healthcare API dataset.

    See
    https://github.com/GoogleCloudPlatform/python-docs-samples/tree/main/healthcare/api-client/v1/datasets
    before running the sample.
    See
    https://googleapis.github.io/google-api-python-client/docs/dyn/healthcare_v1.projects.locations.datasets.html#create
    for the Python API reference.

    Args:
      project_id: The project ID or project number of the Google Cloud project you want
          to use.
      location: The name of the dataset's location.
      dataset_id: The ID of the dataset to create.

    Returns:
      A dictionary representing a long-running operation that results from
      calling the 'CreateDataset' method. Dataset creation is typically fast.
    """
    # Imports the Python built-in time module.
    import time

    # Imports the Google API Discovery Service.
    from googleapiclient import discovery

    # Imports HttpError from the Google Python API client errors module.
    from googleapiclient.errors import HttpError

    api_version = "v1"
    service_name = "healthcare"
    # Returns an authorized API client by discovering the Healthcare API
    # and using GOOGLE_APPLICATION_CREDENTIALS environment variable.
    client = discovery.build(service_name, api_version)

    # TODO(developer): Uncomment these lines and replace with your values.
    # project_id = 'my-project'
    # location = 'us-central1'
    # dataset_id = 'my-dataset'
    dataset_parent = f"projects/{project_id}/locations/{location}"

    request = (
        client.projects()
        .locations()
        .datasets()
        .create(parent=dataset_parent, body={}, datasetId=dataset_id)
    )

    # Wait for operation to complete.
    start_time = time.time()
    max_time = 600  # 10 minutes, but dataset creation is typically only a few seconds.

    try:
        operation = request.execute()
        while not operation.get("done", False):
            # Poll until the operation finishes.
            print("Waiting for operation to finish...")
            if time.time() - start_time > max_time:
                raise TimeoutError("Timed out waiting for operation to finish.")
            operation = (
                client.projects()
                .locations()
                .datasets()
                .operations()
                .get(name=operation["name"])
                .execute()
            )
            # Wait 5 seconds between each poll to the operation.
            time.sleep(5)

        if "error" in operation:
            raise RuntimeError(f"Create dataset operation failed: {operation['error']}")
        else:
            dataset_name = operation["response"]["name"]
            print(f"Created dataset: {dataset_name}")
            return operation

    except HttpError as err:
        # A common error is when the dataset already exists.
        if err.resp.status == 409:
            print(f"Dataset with ID {dataset_id} already exists.")
            return
        else:
            raise err

import (
	"context"
	"fmt"
	"io"

	healthcare "google.golang.org/api/healthcare/v1"
)

// createDICOMStore creates a DICOM store.
func createDICOMStore(w io.Writer, projectID, location, datasetID, dicomStoreID string) error {
	ctx := context.Background()

	healthcareService, err := healthcare.NewService(ctx)
	if err != nil {
		return fmt.Errorf("healthcare.NewService: %w", err)
	}

	storesService := healthcareService.Projects.Locations.Datasets.DicomStores

	store := &healthcare.DicomStore{}
	parent := fmt.Sprintf("projects/%s/locations/%s/datasets/%s", projectID, location, datasetID)

	resp, err := storesService.Create(parent, store).DicomStoreId(dicomStoreID).Do()
	if err != nil {
		return fmt.Errorf("Create: %w", err)
	}

	fmt.Fprintf(w, "Created DICOM store: %q\n", resp.Name)
	return nil
}

import com.google.api.client.http.HttpRequestInitializer;
import com.google.api.client.http.javanet.NetHttpTransport;
import com.google.api.client.json.JsonFactory;
import com.google.api.client.json.gson.GsonFactory;
import com.google.api.services.healthcare.v1.CloudHealthcare;
import com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets.DicomStores;
import com.google.api.services.healthcare.v1.CloudHealthcareScopes;
import com.google.api.services.healthcare.v1.model.DicomStore;
import com.google.auth.http.HttpCredentialsAdapter;
import com.google.auth.oauth2.GoogleCredentials;
import java.io.IOException;
import java.util.Collections;
import java.util.HashMap;
import java.util.Map;

public class DicomStoreCreate {
  private static final String DATASET_NAME = "projects/%s/locations/%s/datasets/%s";
  private static final JsonFactory JSON_FACTORY = new GsonFactory();
  private static final NetHttpTransport HTTP_TRANSPORT = new NetHttpTransport();

  public static void dicomStoreCreate(String datasetName, String dicomStoreId) throws IOException {
    // String datasetName =
    //     String.format(DATASET_NAME, "your-project-id", "your-region-id", "your-dataset-id");

    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();

    // Configure the dicomStore to be created.
    Map<String, String> labels = new HashMap<>();
    labels.put("key1", "value1");
    labels.put("key2", "value2");
    DicomStore content = new DicomStore().setLabels(labels);

    // Create request and configure any parameters.
    DicomStores.Create request =
        client
            .projects()
            .locations()
            .datasets()
            .dicomStores()
            .create(datasetName, content)
            .setDicomStoreId(dicomStoreId);

    // Execute the request and process the results.
    DicomStore response = request.execute();
    System.out.println("DICOM store created: " + response.toPrettyString());
  }

  private static CloudHealthcare createClient() throws IOException {
    // Use Application Default Credentials (ADC) to authenticate the requests
    // For more information see https://cloud.google.com/docs/authentication/production
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));

    // Create a HttpRequestInitializer, which will provide a baseline configuration to all requests.
    HttpRequestInitializer requestInitializer =
        request -> {
          new HttpCredentialsAdapter(credential).initialize(request);
          request.setConnectTimeout(60000); // 1 minute connect timeout
          request.setReadTimeout(60000); // 1 minute read timeout
        };

    // Build the client for interacting with the service.
    return new CloudHealthcare.Builder(HTTP_TRANSPORT, JSON_FACTORY, requestInitializer)
        .setApplicationName("your-application-name")
        .build();
  }
}

const google = require('@googleapis/healthcare');
const healthcare = google.healthcare({
  version: 'v1',
  auth: new google.auth.GoogleAuth({
    scopes: ['https://www.googleapis.com/auth/cloud-platform'],
  }),
});

const createDicomStore = async () => {
  // TODO(developer): uncomment these lines before running the sample
  // const cloudRegion = 'us-central1';
  // const projectId = 'adjective-noun-123';
  // const datasetId = 'my-dataset';
  // const dicomStoreId = 'my-dicom-store';
  const parent = `projects/${projectId}/locations/${cloudRegion}/datasets/${datasetId}`;
  const request = {parent, dicomStoreId};

  await healthcare.projects.locations.datasets.dicomStores.create(request);
  console.log(`Created DICOM store: ${dicomStoreId}`);
};

createDicomStore();

def create_dicom_store(project_id, location, dataset_id, dicom_store_id):
    """Creates a new DICOM store within the parent dataset.

    See https://github.com/GoogleCloudPlatform/python-docs-samples/tree/main/healthcare/api-client/v1/dicom
    before running the sample."""
    # Imports the Google API Discovery Service.
    from googleapiclient import discovery

    api_version = "v1"
    service_name = "healthcare"
    # Returns an authorized API client by discovering the Healthcare API
    # and using GOOGLE_APPLICATION_CREDENTIALS environment variable.
    client = discovery.build(service_name, api_version)

    # TODO(developer): Uncomment these lines and replace with your values.
    # project_id = 'my-project'  # replace with your GCP project ID
    # location = 'us-central1'  # replace with the parent dataset's location
    # dataset_id = 'my-dataset'  # replace with the DICOM store's parent dataset ID
    # dicom_store_id = 'my-dicom-store'  # replace with the DICOM store's ID
    dicom_store_parent = "projects/{}/locations/{}/datasets/{}".format(
        project_id, location, dataset_id
    )

    request = (
        client.projects()
        .locations()
        .datasets()
        .dicomStores()
        .create(parent=dicom_store_parent, body={}, dicomStoreId=dicom_store_id)
    )

    response = request.execute()
    print(f"Created DICOM store: {dicom_store_id}")
    return response

import (
	"context"
	"fmt"
	"io"

	healthcare "google.golang.org/api/healthcare/v1"
)

// dicomWebSearchInstances searches instances.
func dicomWebSearchInstances(w io.Writer, projectID, location, datasetID, dicomStoreID string) error {
	// projectID := "my-project"
	// location := "us-central1"
	// datasetID := "my-dataset"
	// dicomStoreID := "my-dicom-store"
	ctx := context.Background()

	healthcareService, err := healthcare.NewService(ctx)
	if err != nil {
		return fmt.Errorf("healthcare.NewService: %w", err)
	}

	storesService := healthcareService.Projects.Locations.Datasets.DicomStores

	parent := fmt.Sprintf("projects/%s/locations/%s/datasets/%s/dicomStores/%s", projectID, location, datasetID, dicomStoreID)

	resp, err := storesService.SearchForInstances(parent, "instances").Do()
	if err != nil {
		return fmt.Errorf("SearchForInstances: %w", err)
	}

	defer resp.Body.Close()

	respBytes, err := io.ReadAll(resp.Body)
	if err != nil {
		return fmt.Errorf("ioutil.ReadAll: %w", err)
	}

	if resp.StatusCode > 299 {
		return fmt.Errorf("SearchForInstances: status %d %s: %s", resp.StatusCode, resp.Status, respBytes)
	}

	respString := string(respBytes)
	fmt.Fprintf(w, "Found instances: %s\n", respString)
	return nil
}

import com.google.api.client.http.HttpRequestInitializer;
import com.google.api.client.http.HttpResponse;
import com.google.api.client.http.javanet.NetHttpTransport;
import com.google.api.client.json.JsonFactory;
import com.google.api.client.json.gson.GsonFactory;
import com.google.api.services.healthcare.v1.CloudHealthcare;
import com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets.DicomStores;
import com.google.api.services.healthcare.v1.CloudHealthcareScopes;
import com.google.auth.http.HttpCredentialsAdapter;
import com.google.auth.oauth2.GoogleCredentials;
import java.io.IOException;
import java.util.Collections;

public class DicomWebSearchForInstances {
  private static final String DICOM_NAME = "projects/%s/locations/%s/datasets/%s/dicomStores/%s";
  private static final JsonFactory JSON_FACTORY = new GsonFactory();
  private static final NetHttpTransport HTTP_TRANSPORT = new NetHttpTransport();

  public static void dicomWebSearchForInstances(String dicomStoreName) throws IOException {
    // String dicomStoreName =
    //    String.format(
    //        DICOM_NAME, "your-project-id", "your-region-id", "your-dataset-id", "your-dicom-id");

    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();

    // Create request and configure any parameters.
    DicomStores.SearchForInstances request =
        client
            .projects()
            .locations()
            .datasets()
            .dicomStores()
            .searchForInstances(dicomStoreName, "instances");

    // Execute the request and process the results.
    HttpResponse response = request.executeUnparsed();
    System.out.println("Dicom store instances found: \n" + response.toString());
  }

  private static CloudHealthcare createClient() throws IOException {
    // Use Application Default Credentials (ADC) to authenticate the requests
    // For more information see https://cloud.google.com/docs/authentication/production
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));

    // Create a HttpRequestInitializer, which will provide a baseline configuration to all requests.
    HttpRequestInitializer requestInitializer =
        request -> {
          new HttpCredentialsAdapter(credential).initialize(request);
          request.setConnectTimeout(60000); // 1 minute connect timeout
          request.setReadTimeout(60000); // 1 minute read timeout
        };

    // Build the client for interacting with the service.
    return new CloudHealthcare.Builder(HTTP_TRANSPORT, JSON_FACTORY, requestInitializer)
        .setApplicationName("your-application-name")
        .build();
  }
}

const google = require('@googleapis/healthcare');
const healthcare = google.healthcare({
  version: 'v1',
  auth: new google.auth.GoogleAuth({
    scopes: ['https://www.googleapis.com/auth/cloud-platform'],
  }),
});

const dicomWebSearchForInstances = async () => {
  // TODO(developer): uncomment these lines before running the sample
  // const cloudRegion = 'us-central1';
  // const projectId = 'adjective-noun-123';
  // const datasetId = 'my-dataset';
  // const dicomStoreId = 'my-dicom-store';
  const parent = `projects/${projectId}/locations/${cloudRegion}/datasets/${datasetId}/dicomStores/${dicomStoreId}`;
  const dicomWebPath = 'instances';
  const request = {parent, dicomWebPath};

  const instances =
    await healthcare.projects.locations.datasets.dicomStores.searchForInstances(
      request,
      {
        headers: {Accept: 'application/dicom+json,multipart/related'},
      }
    );
  console.log(`Found ${instances.data.length} instances:`);
  console.log(JSON.stringify(instances.data));
};

dicomWebSearchForInstances();

def dicomweb_search_instance(project_id, location, dataset_id, dicom_store_id):
    """Handles the GET requests specified in DICOMweb standard.

    See https://github.com/GoogleCloudPlatform/python-docs-samples/tree/main/healthcare/api-client/v1/dicom
    before running the sample."""

    # Imports the google.auth.transport.requests transport
    from google.auth.transport import requests

    # Imports a module to allow authentication using Application Default Credentials (ADC)
    import google.auth

    # Gets credentials from the environment. google.auth.default() returns credentials and the
    # associated project ID, but in this sample, the project ID is passed in manually.
    credentials, _ = google.auth.default()

    scoped_credentials = credentials.with_scopes(
        ["https://www.googleapis.com/auth/cloud-platform"]
    )
    # Creates a requests Session object with the credentials.
    session = requests.AuthorizedSession(scoped_credentials)

    # URL to the Cloud Healthcare API endpoint and version
    base_url = "https://healthcare.googleapis.com/v1"

    # TODO(developer): Uncomment these lines and replace with your values.
    # project_id = 'my-project'  # replace with your GCP project ID
    # location = 'us-central1'  # replace with the parent dataset's location
    # dataset_id = 'my-dataset'  # replace with the parent dataset's ID
    # dicom_store_id = 'my-dicom-store' # replace with the DICOM store ID
    url = f"{base_url}/projects/{project_id}/locations/{location}"

    dicomweb_path = "{}/datasets/{}/dicomStores/{}/dicomWeb/instances".format(
        url, dataset_id, dicom_store_id
    )

    # Sets required application/dicom+json; charset=utf-8 header on the request
    headers = {"Content-Type": "application/dicom+json; charset=utf-8"}

    response = session.get(dicomweb_path, headers=headers)
    response.raise_for_status()

    instances = response.json()

    print("Instances:")
    print(json.dumps(instances, indent=2))

    return instances

import (
	"context"
	"fmt"
	"io"

	healthcare "google.golang.org/api/healthcare/v1"
)

// createFHIRStore creates an FHIR store.
func createFHIRStore(w io.Writer, projectID, location, datasetID, fhirStoreID string) error {
	ctx := context.Background()

	healthcareService, err := healthcare.NewService(ctx)
	if err != nil {
		return fmt.Errorf("healthcare.NewService: %w", err)
	}

	storesService := healthcareService.Projects.Locations.Datasets.FhirStores

	parent := fmt.Sprintf("projects/%s/locations/%s/datasets/%s", projectID, location, datasetID)
	version := "R4"

	resp, err := storesService.Create(parent, &healthcare.FhirStore{Version: version}).FhirStoreId(fhirStoreID).Do()
	if err != nil {
		return fmt.Errorf("Create: %w", err)
	}

	fmt.Fprintf(w, "Created FHIR store: %q\n", resp.Name)
	return nil
}

import com.google.api.client.http.HttpRequestInitializer;
import com.google.api.client.http.javanet.NetHttpTransport;
import com.google.api.client.json.JsonFactory;
import com.google.api.client.json.gson.GsonFactory;
import com.google.api.services.healthcare.v1.CloudHealthcare;
import com.google.api.services.healthcare.v1.CloudHealthcare.Projects.Locations.Datasets.FhirStores;
import com.google.api.services.healthcare.v1.CloudHealthcareScopes;
import com.google.api.services.healthcare.v1.model.FhirStore;
import com.google.auth.http.HttpCredentialsAdapter;
import com.google.auth.oauth2.GoogleCredentials;
import java.io.IOException;
import java.util.Collections;
import java.util.HashMap;
import java.util.Map;

public class FhirStoreCreate {
  private static final String DATASET_NAME = "projects/%s/locations/%s/datasets/%s";
  private static final JsonFactory JSON_FACTORY = new GsonFactory();
  private static final NetHttpTransport HTTP_TRANSPORT = new NetHttpTransport();

  public static void fhirStoreCreate(String datasetName, String fhirStoreId) throws IOException {
    // String datasetName =
    //     String.format(DATASET_NAME, "your-project-id", "your-region-id", "your-dataset-id");
    // String fhirStoreId = "your-fhir-id"

    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();

    // Configure the FhirStore to be created.
    Map<String, String> labels = new HashMap<>();
    labels.put("key1", "value1");
    labels.put("key2", "value2");
    String version = "STU3";
    FhirStore content = new FhirStore().setLabels(labels).setVersion(version);

    // Create request and configure any parameters.
    FhirStores.Create request =
        client
            .projects()
            .locations()
            .datasets()
            .fhirStores()
            .create(datasetName, content)
            .setFhirStoreId(fhirStoreId);

    // Execute the request and process the results.
    FhirStore response = request.execute();
    System.out.println("FHIR store created: " + response.toPrettyString());
  }

  private static CloudHealthcare createClient() throws IOException {
    // Use Application Default Credentials (ADC) to authenticate the requests
    // For more information see https://cloud.google.com/docs/authentication/production
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));

    // Create a HttpRequestInitializer, which will provide a baseline configuration to all requests.
    HttpRequestInitializer requestInitializer =
        request -> {
          new HttpCredentialsAdapter(credential).initialize(request);
          request.setConnectTimeout(60000); // 1 minute connect timeout
          request.setReadTimeout(60000); // 1 minute read timeout
        };

    // Build the client for interacting with the service.
    return new CloudHealthcare.Builder(HTTP_TRANSPORT, JSON_FACTORY, requestInitializer)
        .setApplicationName("your-application-name")
        .build();
  }
}

const google = require('@googleapis/healthcare');
const healthcare = google.healthcare({
  version: 'v1',
  auth: new google.auth.GoogleAuth({
    scopes: ['https://www.googleapis.com/auth/cloud-platform'],
  }),
});

const createFhirStore = async () => {
  // TODO(developer): uncomment these lines before running the sample
  // const cloudRegion = 'us-central1';
  // const projectId = 'adjective-noun-123';
  // const datasetId = 'my-dataset';
  // const fhirStoreId = 'my-fhir-store';
  // const version = 'STU3';
  const parent = `projects/${projectId}/locations/${cloudRegion}/datasets/${datasetId}`;
  const request = {
    parent,
    fhirStoreId,
    resource: {
      version,
    },
  };

  await healthcare.projects.locations.datasets.fhirStores.create(request);
  console.log(`Created FHIR store: ${fhirStoreId}`);
};

createFhirStore();

def create_fhir_store(project_id, location, dataset_id, fhir_store_id, version):
    """Creates a new FHIR store within the parent dataset.

    See https://github.com/GoogleCloudPlatform/python-docs-samples/tree/main/healthcare/api-client/v1/fhir
    before running the sample."""
    # Imports the Google API Discovery Service.
    from googleapiclient import discovery

    api_version = "v1"
    service_name = "healthcare"
    # Returns an authorized API client by discovering the Healthcare API
    # and using GOOGLE_APPLICATION_CREDENTIALS environment variable.
    client = discovery.build(service_name, api_version)

    # TODO(developer): Uncomment these lines and replace with your values.
    # project_id = 'my-project'  # replace with your GCP project ID
    # location = 'us-central1'  # replace with the parent dataset's location
    # dataset_id = 'my-dataset'  # replace with the FHIR store's parent dataset ID
    # fhir_store_id = 'my-fhir-store'  # replace with the FHIR store's ID
    # version = 'R4'  # replace with the FHIR store version
    fhir_store_parent = "projects/{}/locations/{}/datasets/{}".format(
        project_id, location, dataset_id
    )

    body = {"version": version}

    request = (
        client.projects()
        .locations()
        .datasets()
        .fhirStores()
        .create(parent=fhir_store_parent, body=body, fhirStoreId=fhir_store_id)
    )

    response = request.execute()
    print(f"Created FHIR store: {fhir_store_id}")

    return response

import (
	"bytes"
	"context"
	"encoding/json"
	"fmt"
	"io"

	healthcare "google.golang.org/api/healthcare/v1"
)

// createFHIRResource creates an FHIR resource.
func createFHIRResource(w io.Writer, projectID, location, datasetID, fhirStoreID, resourceType string) error {
	ctx := context.Background()

	healthcareService, err := healthcare.NewService(ctx)
	if err != nil {
		return fmt.Errorf("healthcare.NewService: %w", err)
	}

	fhirService := healthcareService.Projects.Locations.Datasets.FhirStores.Fhir

	payload := map[string]interface{}{
		"resourceType": resourceType,
		"language":     "FR",
	}
	jsonPayload, err := json.Marshal(payload)
	if err != nil {
		return fmt.Errorf("json.Encode: %w", err)
	}

	parent := fmt.Sprintf("projects/%s/locations/%s/datasets/%s/fhirStores/%s", projectID, location, datasetID, fhirStoreID)

	call := fhirService.Create(parent, resourceType, bytes.NewReader(jsonPayload))
	call.Header().Set("Content-Type", "application/fhir+json;charset=utf-8")
	resp, err := call.Do()
	if err != nil {
		return fmt.Errorf("Create: %w", err)
	}
	defer resp.Body.Close()

	respBytes, err := io.ReadAll(resp.Body)
	if err != nil {
		return fmt.Errorf("could not read response: %w", err)
	}

	if resp.StatusCode > 299 {
		return fmt.Errorf("Create: status %d %s: %s", resp.StatusCode, resp.Status, respBytes)
	}
	fmt.Fprintf(w, "%s", respBytes)

	return nil
}

import com.google.api.client.http.HttpRequestInitializer;
import com.google.api.client.http.javanet.NetHttpTransport;
import com.google.api.client.json.JsonFactory;
import com.google.api.client.json.gson.GsonFactory;
import com.google.api.services.healthcare.v1.CloudHealthcare;
import com.google.api.services.healthcare.v1.CloudHealthcareScopes;
import com.google.auth.http.HttpCredentialsAdapter;
import com.google.auth.oauth2.GoogleCredentials;
import java.io.IOException;
import java.net.URISyntaxException;
import java.util.Collections;
import org.apache.http.HttpEntity;
import org.apache.http.HttpResponse;
import org.apache.http.HttpStatus;
import org.apache.http.client.HttpClient;
import org.apache.http.client.methods.HttpUriRequest;
import org.apache.http.client.methods.RequestBuilder;
import org.apache.http.client.utils.URIBuilder;
import org.apache.http.entity.StringEntity;
import org.apache.http.impl.client.HttpClients;

public class FhirResourceCreate {
  private static final String FHIR_NAME = "projects/%s/locations/%s/datasets/%s/fhirStores/%s";
  private static final JsonFactory JSON_FACTORY = new GsonFactory();
  private static final NetHttpTransport HTTP_TRANSPORT = new NetHttpTransport();

  public static void fhirResourceCreate(String fhirStoreName, String resourceType)
      throws IOException, URISyntaxException {
    // String fhirStoreName =
    //    String.format(
    //        FHIR_NAME, "your-project-id", "your-region-id", "your-dataset-id", "your-fhir-id");
    // String resourceType = "Patient";

    // Initialize the client, which will be used to interact with the service.
    CloudHealthcare client = createClient();
    HttpClient httpClient = HttpClients.createDefault();
    String uri = String.format("%sv1/%s/fhir/%s", client.getRootUrl(), fhirStoreName, resourceType);
    URIBuilder uriBuilder = new URIBuilder(uri).setParameter("access_token", getAccessToken());
    StringEntity requestEntity =
        new StringEntity("{\"resourceType\": \"" + resourceType + "\", \"language\": \"en\"}");

    HttpUriRequest request =
        RequestBuilder.post()
            .setUri(uriBuilder.build())
            .setEntity(requestEntity)
            .addHeader("Content-Type", "application/fhir+json")
            .addHeader("Accept-Charset", "utf-8")
            .addHeader("Accept", "application/fhir+json; charset=utf-8")
            .build();

    // Execute the request and process the results.
    HttpResponse response = httpClient.execute(request);
    HttpEntity responseEntity = response.getEntity();
    if (response.getStatusLine().getStatusCode() != HttpStatus.SC_CREATED) {
      System.err.print(
          String.format(
              "Exception creating FHIR resource: %s\n", response.getStatusLine().toString()));
      responseEntity.writeTo(System.err);
      throw new RuntimeException();
    }
    System.out.print("FHIR resource created: ");
    responseEntity.writeTo(System.out);
  }

  private static CloudHealthcare createClient() throws IOException {
    // Use Application Default Credentials (ADC) to authenticate the requests
    // For more information see https://cloud.google.com/docs/authentication/production
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));

    // Create a HttpRequestInitializer, which will provide a baseline configuration to all requests.
    HttpRequestInitializer requestInitializer =
        request -> {
          new HttpCredentialsAdapter(credential).initialize(request);
          request.setConnectTimeout(60000); // 1 minute connect timeout
          request.setReadTimeout(60000); // 1 minute read timeout
        };

    // Build the client for interacting with the service.
    return new CloudHealthcare.Builder(HTTP_TRANSPORT, JSON_FACTORY, requestInitializer)
        .setApplicationName("your-application-name")
        .build();
  }

  private static String getAccessToken() throws IOException {
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));

    return credential.refreshAccessToken().getTokenValue();
  }
}

const google = require('@googleapis/healthcare');
const healthcare = google.healthcare({
  version: 'v1',
  auth: new google.auth.GoogleAuth({
    scopes: ['https://www.googleapis.com/auth/cloud-platform'],
  }),
  headers: {'Content-Type': 'application/fhir+json'},
});

async function createFhirResource() {
  // Replace the following body with the data for the resource you want to
  // create.
  const body = {
    name: [{use: 'official', family: 'Smith', given: ['Darcy']}],
    gender: 'female',
    birthDate: '1970-01-01',
    resourceType: 'Patient',
  };

  // TODO(developer): uncomment these lines before running the sample
  // const cloudRegion = 'us-central1';
  // const projectId = 'adjective-noun-123';
  // const datasetId = 'my-dataset';
  // const fhirStoreId = 'my-fhir-store';
  // const resourceType = 'Patient';
  const parent = `projects/${projectId}/locations/${cloudRegion}/datasets/${datasetId}/fhirStores/${fhirStoreId}`;

  const request = {parent, type: resourceType, requestBody: body};
  const resource =
    await healthcare.projects.locations.datasets.fhirStores.fhir.create(
      request
    );
  console.log(`Created FHIR resource with ID ${resource.data.id}`);
  console.log(resource.data);
}

createFhirResource();

# Imports the types Dict and Any for runtime type hints.
from typing import Any, Dict  # noqa: E402


def create_patient(
    project_id: str,
    location: str,
    dataset_id: str,
    fhir_store_id: str,
) -> Dict[str, Any]:
    """Creates a new Patient resource in a FHIR store.

    See
    https://github.com/GoogleCloudPlatform/python-docs-samples/tree/main/healthcare/api-client/v1/fhir
    before running the sample.
    See
    https://googleapis.github.io/google-api-python-client/docs/dyn/healthcare_v1.projects.locations.datasets.fhirStores.fhir.html#create
    for the Python API reference.

    Args:
      project_id: The project ID or project number of the Cloud project you want
        to use.
      location: The name of the parent dataset's location.
      dataset_id: The name of the parent dataset.
      fhir_store_id: The name of the FHIR store that holds the Patient resource.

    Returns:
      A dict representing the created Patient resource.
    """
    # Imports the Google API Discovery Service.
    from googleapiclient import discovery

    api_version = "v1"
    service_name = "healthcare"

    # Returns an authorized API client by discovering the Healthcare API
    # and using GOOGLE_APPLICATION_CREDENTIALS environment variable.
    client = discovery.build(service_name, api_version)

    # TODO(developer): Uncomment these lines and replace with your values.
    # project_id = 'my-project'
    # location = 'us-central1'
    # dataset_id = 'my-dataset'
    # fhir_store_id = 'my-fhir-store'
    fhir_store_parent = (
        f"projects/{project_id}/locations/{location}/datasets/{dataset_id}"
    )
    fhir_store_name = f"{fhir_store_parent}/fhirStores/{fhir_store_id}"

    patient_body = {
        "name": [{"use": "official", "family": "Smith", "given": ["Darcy"]}],
        "gender": "female",
        "birthDate": "1970-01-01",
        "resourceType": "Patient",
    }

    request = (
        client.projects()
        .locations()
        .datasets()
        .fhirStores()
        .fhir()
        .create(parent=fhir_store_name, type="Patient", body=patient_body)
    )
    # Sets required application/fhir+json header on the googleapiclient.http.HttpRequest.
    request.headers["content-type"] = "application/fhir+json;charset=utf-8"
    response = request.execute()

    print(f"Created Patient resource with ID {response['id']}")
    return response

import com.google.api.client.http.HttpRequestInitializer;
import com.google.api.client.http.javanet.NetHttpTransport;
import com.google.api.client.json.JsonFactory;
import com.google.api.client.json.gson.GsonFactory;
import com.google.api.services.healthcare.v1.CloudHealthcare;
import com.google.api.services.healthcare.v1.CloudHealthcareScopes;
import com.google.auth.http.HttpCredentialsAdapter;
import com.google.auth.oauth2.GoogleCredentials;
import java.io.IOException;
import java.net.URISyntaxException;
import java.util.Collections;
import org.apache.http.HttpEntity;
import org.apache.http.HttpResponse;
import org.apache.http.HttpStatus;
import org.apache.http.client.HttpClient;
import org.apache.http.client.methods.HttpUriRequest;
import org.apache.http.client.methods.RequestBuilder;
import org.apache.http.client.utils.URIBuilder;
import org.apache.http.entity.StringEntity;
import org.apache.http.impl.client.HttpClients;

public class FhirResourceSearchGet {
  private static final String FHIR_NAME =
      "projects/%s/locations/%s/datasets/%s/fhirStores/%s/fhir/%s";
  // The endpoint URL for the Healthcare API. Required for HttpClient.
  private static final String API_ENDPOINT = "https://healthcare.googleapis.com";
  private static final JsonFactory JSON_FACTORY = new GsonFactory();
  private static final NetHttpTransport HTTP_TRANSPORT = new NetHttpTransport();

  public static void fhirResourceSearchGet(String resourceName)
      throws IOException, URISyntaxException {
    // String resourceName =
    //    String.format(
    //        FHIR_NAME, "project-id", "region-id", "dataset-id", "fhir-store-id");
    // String resourceType = "Patient";

    // Instantiate the client, which will be used to interact with the service.
    HttpClient httpClient = HttpClients.createDefault();
    String uri = String.format("%s/v1/%s", API_ENDPOINT, resourceName);
    URIBuilder uriBuilder = new URIBuilder(uri).setParameter("access_token", getAccessToken());
    // To set additional parameters for search filtering, add them to the URIBuilder. For
    // example, to search for a Patient with the family name "Smith", specify the following:
    // uriBuilder.setParameter("family:exact", "Smith");

    HttpUriRequest request =
        RequestBuilder.get()
            .setUri(uriBuilder.build())
            .build();

    // Execute the request and process the results.
    HttpResponse response = httpClient.execute(request);
    HttpEntity responseEntity = response.getEntity();
    if (response.getStatusLine().getStatusCode() != HttpStatus.SC_OK) {
      System.err.print(
          String.format(
              "Exception searching GET FHIR resources: %s\n", response.getStatusLine().toString()));
      responseEntity.writeTo(System.err);
      throw new RuntimeException();
    }
    System.out.println("FHIR resource GET search results: ");
    responseEntity.writeTo(System.out);
  }

  private static CloudHealthcare createClient() throws IOException {
    // Use Application Default Credentials (ADC) to authenticate the requests
    // For more information see https://cloud.google.com/docs/authentication/production
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));
    // Create a HttpRequestInitializer, which will provide a baseline configuration to all requests.
    HttpRequestInitializer requestInitializer =
        request -> {
          new HttpCredentialsAdapter(credential).initialize(request);
          request.setConnectTimeout(60000); // 1 minute connect timeout
          request.setReadTimeout(60000); // 1 minute read timeout
        };
    // Build the client for interacting with the service.
    return new CloudHealthcare.Builder(HTTP_TRANSPORT, JSON_FACTORY, requestInitializer)
        .setApplicationName("your-application-name")
        .build();
  }

  private static String getAccessToken() throws IOException {
    GoogleCredentials credential =
        GoogleCredentials.getApplicationDefault()
            .createScoped(Collections.singleton(CloudHealthcareScopes.CLOUD_PLATFORM));

    return credential.refreshAccessToken().getTokenValue();
  }
}

// Import google-auth-library for authentication.
const {GoogleAuth} = require('google-auth-library');

const searchFhirResourcesGet = async () => {
  const auth = new GoogleAuth({
    scopes: 'https://www.googleapis.com/auth/cloud-platform',
  });
  // TODO(developer): uncomment these lines before running the sample
  // const cloudRegion = 'us-central1';
  // const projectId = 'adjective-noun-123';
  // const datasetId = 'my-dataset';
  // const fhirStoreId = 'my-fhir-store';
  // const resourceType = 'Patient';
  const url = `https://healthcare.googleapis.com/v1/projects/${projectId}/locations/${cloudRegion}/datasets/${datasetId}/fhirStores/${fhirStoreId}/fhir/${resourceType}`;

  const params = {};
  // Specify search filters in a params object. For example, to filter on a
  // Patient with the last name "Smith", set resourceType to "Patient" and
  // specify the following params:
  // params = {'family:exact' : 'Smith'};
  const client = await auth.getClient();
  const response = await client.request({url, method: 'GET', params});
  const resources = response.data.entry;
  console.log(`Resources found: ${resources.length}`);
  console.log(JSON.stringify(resources, null, 2));
};

searchFhirResourcesGet();